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REFERRED JOURNAL PUBLICATIONS and BOOK CONTRIBUTIONS

    2013
  1. Boukouvala, F., Ierapetritou, M. Surrogate-Based Optimization of Expensive Flowsheet Modeling for Continuous Pharmaceutical Manufacturing. Journal of Pharmaceutical Innovation. DOI: 10.1007/s12247-013-9154-1 , 2013.
  2. Gao, Y., Boukouvala, F., Engisch, W., Meng, W., Muzzio, F., Ierapetritou, M. Improving Continuous Powder Blending Performance Using Projection to Latent Structures Regression. Journal of Pharmaceutical Innovation. DOI: 10.1007/s12247-013-9152-3 , 2013.
  3. Singh, R., Ierapetritou, M., Ramachandran, R. System-wide hybrid model predictive control of a continuous pharmaceutical tablet manufacturing process via direct compaction. European Journal of Pharmaceutics and Biopharmaceutics. DOI: 10.1016/j.ejpb.2013.02.019 , 2013.
  4. Boukouvala, F., Ierapetritou, M. Reduced-order discrete element method modeling. Chemical Engineering Science. 95 , 12, 2013.
  5. Triebl, C., Nikolakis,V., Ierapetritou, M. Simulation and economic analysis of 5-hydroxymethylfurfural conversion to 2,5-furandicarboxylic acid. Computers and Chemical Engineering. 52 , 26, 2013.
  6. Boukouvala, F., Chaudhury, A., Sen, M., Zhou, R., Mioduszewski, L., Ierapetritou, M., Ramachandran, R. Computer-Aided Flowsheet Simulation of a Pharmaceutical Tablet Manufacturing Process Incorporating Wet Granulation. Journal of Pharmaceutical Innovation. 8 , 11, 2013.
  7. Lin, Z., Nikolakis, V., Ierapetritou, M. Aromatics from lignocellulosic biomass: Economic analysis of the production of pxylene from 5-hydroxymethylfurfural. AIChE Journal. DOI 10.1002/aic.13969 , 2013.
  8. Zhang, S., Androulakis, I.P., Ierapetritou, M.G. A Hybrid Kinetic Mechanism Reduction Scheme based on the On-the-fly Reduction and Quasi-steady-state Approximation. Chemical Engineering Science. DOI: 10.1016/j.ces.2013.01.066 , 2013.
  9. Mattick, J., Yang, Q., Orman, M.A., Ierapetritou, M.G., Berthiaume, F., Gale, S.C., Androulakis, I.P. Impact of burn priming on immune and metabolic functions of whole Liver in a rat cecal ligation and puncture model. International Journal of Burns and Trauma. 3 , 55, 2013.
  10. Orman, M.A., Ierapetritou, M.G., Androulakis, I.P.,Berthiaume, F. Effect of Fasting on the Metabolic Response of Liver to Experimental Burn Injury. PLoS ONE. doi:10.1371/journal.pone.0054825 , 2013.
  11. Gao, Y., Ierapetritou, M.G., and Muzzio, F.J. Determination of the Confidence Interval of the Relative Standard Deviation Using Convolution. Journal of Pharmaceutical Innovation. DOI 10.1007/s12247-012-9144-8 , 2013.
  12. Gao, Y., Muzzio, F.J., and Ierapetritou, M.G. Scale-up strategy for continuous powder blending process. Powder Technology. 235(0) , 55, 2013.

    13. 2012
  13. Nikolopoulou, A. Ierapetritou, M. Hybrid simulation based optimization approach for supply chain management. Computers and Chemical Engineering. 47 , 183, 2012.
  14. Zhuge, J. Ierapetritou, M.Integration of Scheduling and Control with Closed Loop Implementation. Industrial & Engineering Chemistry Research. 51, 8550, 2012.
  15. Yang, Q., Orman, M., Ierapetritou, M., Berthiaume, F., Androulakis, I.P.Dynamics of short-term gene expression profiling in liver following thermal injury. Journal of Surgical Research. 176, 549, 2012.
  16. Yang, Q., Mattick, J.S., Orman, M., Nguyen, N., Ierapetritou, M., Berthiaume, F., Androulakis, I.P.Dynamics of hepatic gene expression profile in a rat cecal ligation and puncture model. Journal of Surgical Research. 176, 583, 2012.
  17. Orman, M.,Ierapetritou, M., Berthiaume, F., Androulakis, I.P.Long-term dynamic profiling of inflammatory mediators in double-hit burn and sepsis animal models. Cytokine. 58, 307, 2012.
  18. Singh R.,Ierapetritou,M.,Ramachandran R. An engineering study on the enhanced control and operation of continuous manufacturing of pharmaceutical tablets via roller compaction International Journal of Pharmaceutics. 438 (1-2), 307, 2012.
  19. Singh R., Boukouvala F.,Jayjock E.,Ramachandran R.,Ierapetritou M.,Muzzio F. Flexible Multipurpose Continuous Processing of Pharmaceutical Tablet Manufacturing Process. GMP news, European Compliance Academic (ECE)
    20. 2012.
  20. Singh, R., Boukouvala, F., Jayjock, E., Ramachandran, R. Ierapetritou, M., Muzzio, F. Flexible Multipurpose Continuous Processing Pharmaceutical Processing Magazine. 27 (1-2), 22, 2012.
    21. 2012.
  21. Gao Y., Muzzio F., Ierapetritou M.G. Optimizing continuous powder mixing processes using periodic section modeling Chemical Engineering Science. 80, 70, 2012.
  22. Gao, Y., Ierapetritou, M.G., and Muzzio, F.J. Periodic section modeling of convective continuous powder mixing processes. AIChE Journal. 51(1) , 69, 2012.
  23. Gao Y., Muzzio F., Ierapetritou M.G. A review of the Residence Time Distribution (RTD) applications in solid unit operations Powder Technology. 228(1) , 416, 2012.
  24. Nikolopoulou, A., Ierapetritou, M.G. Optimal design of sustainable chemical processes and supply chains: A review. Comp. and Chem. Eng. 44, 94, 2012.
  25. Boukouvala, F., Niotis, V., Ramachandran, R.,Muzzio F.,Ierapetritou, M.G. An integrated approach for dynamic flowsheet modeling and sensitivity analysis of a continuous tablet manufacturing process. Comp. and Chem. Eng. 42, 30, 2012.
  26. Mattick, J.,Yang, Q.,Orman, M., Ierapetritou, M.G., Berthiaume, F., Androulakis, I.P.Long-term gene expression profile dynamics following cecal ligation and puncture in the rat. Journal of Surgical Research, Available online, http://dx.doi.org/10.1016/j.jss.2012.03.052.
  27. Shah, N.K., Ierapetritou, M.G. Integrated production planning and scheduling optimization of multisite, multiproduct process industry. Computers and Chemical Engineering. 37, 214, 2012.
  28. He, K., Ierapetritou, M.G., Androulakis, I.P. Exploring Flux Representations of Complex Kinetics Networks. AICHE Journal. 58(2), 553, 2012.
  29. Zhang, S., Broadbelt, L., Androulakis, I.P., Ierapetritou, M.G. Comparison of Biodiesel Performance Based on HCCI Engine Simulation Using Detailed Mechanism with On-the-fly Reduction. Energy and Fuels. 26(2), 976, 2012.
  30. Orman, M.A., Mattick, J., Androulakis, I.P., Berthiaume,F., Ierapetritou, M.G. Stoichiometry based steady-state hepatic flux analysis: Computational and experimental aspects. Metabolites. 2(1), 268, 2012.
  31. Boukouvala, F., Dubey, A.,Vanarase, A.,Muzzio F.,Ierapetritou, M.G. Computational approaches for studying the granular dynamics of continuous blending processes,2- Population balance and data-based methods. Macromolecular Materials and Eng. 297(1), 9, 2012.
  32. Li, Z., and M.G. Ierapetritou Capacity expansion planning through augmented Lagrangian optimization and scenario decomposition. AIChE Journal, 58 , 871, 2012.
  33. Orman, M.A.,Androulakis, I.P., Berthiaume,F., Ierapetritou, M.G. Metabolic network analysis of perfused livers under fed and fasted states: Incorporating thermodynamic and futile-cycle-associated regulatory constraints. Journal of Theoretical Biology. 293, 101, 2012.
  34. Boukouvala, F., Ierapetritou, M.G. Feasibility analysis of black-box processes using an adaptive sampling kriging-based method. Computers and Chemical Engineering. 36,358,2012.
  35. Dubey, A.,Boukouvala, F.,Keyvan, G.,Hsia, R.,Saranteas, K.,Brone, D.,Misra, T.,Ierapetritou, M.,Muzzio, F. Improvement of Tablet Coating Uniformity Using a Quality by Design Approach. AAPS PharmSciTech, Available online, Doi: 10.1208/s12249-011-9723-x

    36. 2011
  36. Gao, Y., Ierapetritou, M.G., and Muzzio, F.J. Investigation on the effect of blade patterns on continuous solid mixing performance. The Canadian Journal of Chemical Engineering. 89(5), 969, 2011.
  37. Orman, M.A., Berthiaume,F.,Androulakis, I.P., Ierapetritou, M.G. Advanced Stoichiometric Analysis of Metabolic Networks of Mammalian Systems. Critical Reviews in Biomedical Engineering. 39(6), 511, 2011.
  38. Boukouvala, F., Muzzio,F., Ierapetritou, M.G. Dynamic data-driven modeling of pharmaceutical processes. Industrial Engineering and Chemistry Research. 50(11),6743,2011.
  39. Ramachandran,R., Arjunan, J., Chaudhury, A., Ierapetritou, M.G. Model-Based control loop performance assessment of a continuous direct compaction pharmaceutical process. J. Pharm. Innov. 6 , 249, 2011.
  40. Nikolopoulou, A., Ierapetritou, M.G. Integration of operation planning and scheduling in supply chain systems: a review. Chapter 1, In: Scheduling problems and solutions, Nova Science Publishers, 2011.
  41. Yang, Q.,Orman, M.A., Ierapetritou, M.G., Berthiaume,F., Androulakis I.P. Dynamics of short-term gene expression profiling in liver following thermal injury. J. Surg. Res., Available online, doi:10.1016/j.jss.2011.09.052.
  42. Orman, M.A.,Ierapetritou, M.G., Berthiaume,F., Androulakis I.P. The dynamics of the early inflammatory response in double-hit burn and sepsis animal models. Cytokine. 56(2) , 494, 2011.
  43. Orman, M.A., Nguyen, T.T., Ierapetritou, M.G., Berthiaume,F., Androulakis I.P. Comparison of the cytokine and chemokine dynamics of the early inflammatory response in models of burn injury and infection. Cytokine. 55, 362, 2011.
  44. Orman, M.A.,Ierapetritou, M.G.,Androulakis I.P., Berthiaume,F. Metabolic response of perfused livers to various oxygenation conditions. Biotechnology and Bioengineering. 108(12),2947,2011.
  45. Smith,B., Ierapetritou, M.G. Modeling and optimization of product design and portfolio management interface. Computers and Chemical Engineering. 35 , 2579, 2011.
  46. He, K., I.P. Androulakis, M.G. Ierapetritou. Numerical Investigation of Homogeneous Charge Compression Ignition (HCCI) Combustion with Detailed Chemical Kinetics Using On-the-Fly Reduction. Energy and Fuels. 25(8),3369,2011.
  47. Smith,B., Ierapetritou, M.G. Sensitivity-Based product portfolio and design integration. Industrial Eng. & Chem. Research 50, 3919, 2011.
  48. Dubey, A.,Sarkar, A., Ierapetritou, M.G.,Muzzio F. Computational approaches for studying the granular dynamics of continuous blending processes,1- Dem based methods. Macromolecular Materials and Eng. 296, 290, 2011.
  49. Yang, H., Ierapetritou, M.G., Roth C.M. Analysis of Amino Acid Supplementation Effects on Hepatocyte Cultures Using Flux Balance Analysis. OMICS: A Journal of Integrative Biology. 15 , 449, 2011.
  50. Ovacik, M.A.,Sen, B., Euling S.Y., Gaido, K.W., Ierapetritou, M.G., Androulakis I.P.Pathway modeling of microarray data: A case study of pathway activity changes in the testis following in utero exposure to dibutyl phthalate (DBP). Toxicology and Applied Pharmacology, In Press, doi:10.1016/j.taap.2010.09.008
  51. Orman, M.A., Berthiaume,F.,Androulakis I.P., Ierapetritou, M.G. Pathway analysis of liver metabolism under stressed condition. Journal of Theoretical Biology 272 , 131, 2011.
  52. Shah, N., Li, Z., and M.G. Ierapetritou Petroleum refining operations: key issues, advances and opportunities. Ind. Eng. Chem. Res. 50 , 1161, 2011.
  53. Gao Y.,Vanarase A.U., Muzzio F., Ierapetritou M.G. Characterizing continuous powder mixing using residence time distribution. Chemical Engineering Science. 66 , 417, 2011.
  54. Saharidis, G., Androulakis, I., and Ierapetritou, M.G. Model Building Using Bi-level Optimization. Journal of Global Optimization. 49 , 49, 2011.
  55. Shah,N.and M.G. Ierapetritou Short-term scheduling of a large-scale refinery operations: incorporating logistics. AIChE Journal, 57(6) , 1570, 2011.
  56. Gao Y., Muzzio F., Ierapetritou M.G. Characterization of feeder effects on continuous solid mixing using Fourier series analysis. AIChE Journal, 57(5) , 1144, 2011.

    57. 2010
  57. Li, Z., and M.G.Ierapetritou A method for solving the general parametric linear complementarity problem Annals of Operations Research, 181 , 485, 2010.
  58. Orman, M.A., Arai, K., Yarmush, M.L., Androulakis, I.P., Berthiaume,F., Ierapetritou, M.G. Metabolic flux determination in perfused livers by mass balance analysis: Effect of fasting. Biotechnology and Bioengineering, 107 , 1097, 2010.
  59. He, K., I.P. Androulakis, M.G. Ierapetritou. Incorporation of Detailed Chemical Mechanisms in Reactive Flow Simulations Using Element-Flux Analysis. Ind. Eng. Chem. Res. 49 10471, 2010.
  60. Portillo, P.M., Vanarase A.U., Ingram A., Seville J.K., Ierapetritou, M.G., Muzzio, F.J. Investigation of the effect of impeller rotation rate, powder flow rate, and cohesion on powder flow behavior in a continuous blender using PEPT. Chemical Engineering Science, 65 , 5658, 2010.
  61. Iyer, V.V., Ovacik, M.A., Androulakis, I.P., Roth, C.M., Ierapetritou, M.G.Transcriptional and metabolic flux profiling of triadimefon effects on cultured hepatocytes. Toxicology and Applied Pharmacology, 248 , 165, 2010.
  62. Boukouvala, F., Muzzio, F.J., and Ierapetritou, M.G. Design Space of pharmaceutical processes using data-driven-based methods. Journal of Pharmaceutical Innovation, 5 , 119, 2010.
  63. Yang, H., Ierapetritou, M.G., Roth C.M. Effects of amino acid transport limitations on cultured hepatocytes. Biophysical Chemistry, 152 , 89, 2010.
  64. Li, Z., and M.G. Ierapetritou Rolling horizon based planning and scheduling integration with production capacity consideration. Chem. Eng. Science, 65 , 5887, 2010.
  65. Saharidis, G., and M.G. Ierapetritou. Improving benders decomposition using maximum feasible subsystem (MFS) cut generation strategy. Comp. Chem. Eng. 34 , 1237, 2010.
  66. He, K., M.G. Ierapetritou, I.P. Androulakis Integration of on-the-fly kinetic reduction with multidimensional CFD. AIChE J. 56 1305, 2010.
  67. Iyer, V.V., Yang, H., Ierapetritou, M.G., Roth C.M. Effects of Glucose and Insulin Level on HepG2-C3A Cell Metabolism. Biotechnology and Bioengineering, 107 , 347, 2010.
  68. Boukouvala, F., Muzzio, F.J., and Ierapetritou, M.G. Predictive Modeling of Pharmaceutical Processes with Missing and Noisy Data. AIChE Journal. 56 , 2860, 2010.
  69. B. Smith, M.G. Ierapetritou . Integrative Chemical Product Design Strategies: Reflecting Industry Trends and Challenges. Comp. Chem. Eng. 34, 857, 2010.
  70. Li, Z., and M.G. Ierapetritou Production planning and scheduling integration through augmented Lagrangian optimization. Comp. Chem. Eng. 34 , 996, 2010.
  71. Saharidis, G. K. D., M. Minoux, M. G. Ierapetritou.Accelerating Bender's method using covering cut bundle generation. Intl. Trans. in Op. Res., 17, 221, 2010.
  72. E. Davis, M.G. Ierapetritou . A Centroid-Based Sampling Strategy for Kriging Global Modeling and Optimization. AIChE J. 56, 220, 2010.
  73. Saharidis, G. K. D., M. M. Golias, M. Boile, S. Theofanis, M. G. Ierapetritou.The berth scheduling problem with customer differentiation: a new methodological approach based on hierarchical optimization. Int J Adv Manuf Technol, 46, 377, 2010.
  74. He, K., I.P. Androulakis, and M.G. Ierapetritou. Multi-element Flux Analysis for the Incorporation of Detailed Kinetic Mechanisms in Reactive Simulations. Energy Fuels, 24 , 309, 2010.
  75. He, K., I.P. Androulakis, and M.G. Ierapetritou. On-the-fly reduction of kinetic mechanisms using element flux analysis. Chem. Eng. Sci., 65 , 1173, 2010.

    76. 2009
  76. Shah, N., Saharidis, G.K.D.,Jia, Z.,Ierapetritou, M.G. Centralized-decentralized optimization for refinery scheduling. Comp, & Chem. Eng. 33 2091, 2009.
  77. B. Smith, M.G. Ierapetritou . Framework for Consumer- Integrated Optimal Product Design. Industrial& Engineering Chemistry Research 48, 8566, 2009.
  78. Z. Jia, E. Davis, F. J. Muzzio, M.G. Ierapetritou . Predictive Modeling for Pharmaceutical Processes Using Kriging and Response Surface. Journal of Pharmaceutical Innovation 4, 174, 2009.
  79. F.V. Lima, Z. Jia, M.G. Ierapetritou, C. Georgakis. Similarities and differences between the concepts of operability and flexibility: The steady-state case. AIChE J. 56, 702, 2009.
  80. Golias, M.M., Saharidis, G.K., Boile, M., Theofanis, S., Ierapetritou, M.G. The berth allocation problem: Optimizing vessel arrvial times. Journal of Maritime Economics and Logistics . 11, 358, 2009.
  81. Yang, H., C.M. Roth and M.G. Ierapetritou. A Rational Design Approach for Amino Acid Supplementation in Hepatocyte Culture. Biotechnology and Bioengineering. 103, 1176, 2009.
  82. Saharidis, G., and M.G. Ierapetritou. Scheduling of Loading and Unloading of Crude oil in a refinery with combine mixture preparation. Ind. Eng. Chem. Res. 48, 2624, 2009.
  83. Portillo, P.M., M.G. Ierapetritou and F.J. Muzzio Effects of rotation rate, mixing angle, and cohesion in two continuous powder mixers: A statistical approach. Powder Technology. 194, 217, 2009.
  84. M.G. Ierapetritou, P.G. Georgopoulos, C.M. Roth, I.P. Androulakis. Tissue-Level Modeling of Xenobiotic Metabolism in Liver: An Emerging Tool for Enabling Clinical Translational Research. Clinical and Translational Science. 2, 228, 2009.
  85. P. Foteinou, E. Yang, G.K. Saharidis, M.G. Ierapetritou and I.P. Androulakis. A Mixed-Integer Optimization Framework for the Synthesis and Analysis of Regulatory Networks. J Glob Optim. 43 , 263, 2009.
  86. Davis, E., M.G. Ierapetritou A kriging based method for the solution of mixed-integer nonlinear programs containing black-box functions. J Glob Optim. 43 , 191, 2009
  87. Li, Z., M.G. Ierapetritou Integrated planning and scheduling in a decomposition framework. Chemical Engineering Science. 64 , 3585, 2009.
  88. Saharidis, G., M.G. Ierapetritou. Resolution Method for Mixed Integer Bi-level Linear Problems based on Decomposition Technique. Jl. Glob. Opt. 44 , 29, 2009.
  89. Ierapetritou, M.G. and Z. Li. Modeling and Managing Uncertainty in Process Planning and Scheduling. Optimization and Logistics Challenges in the Enterprise. W. Chaovalitwongse et al.(eds.), Springer Optimization and Its Applications. 30, 97, 2009.

    90. 2008
  90. Portillo P.M., Ierapetritou M.G., Tomassone M.S., Mc Dade C., Clancy D., Avontuur P.C., and Muzzio F.J. Quality by Design Methodology for Development and Scale Up of Batch Mixing Processes. Journal of Pharmaceutical Innovation. 3 , 258, 2008.
  91. Davis, E., M.G. Ierapetritou A Kriging-Based Approach to MINLP containing Black-Box Models and Noise. Ind. Eng. Chem. Res. 47 , 6101, 2009.
  92. Euling, S.Y., Makris, S., Sen, B., White, L., Benson, R., Gaido, K.W., Kim, A.S., Hester, S., Wilson, V.S., Keshava, C., Keshava, N., Foster, P.M., Androulakis, I.P., Ovacik, M., Ierapetritou, M.G., Gray, L.E., Thompson, C., and Chiu, W. An approach to using genomics data in risk assessment: Dibutyl phthalate (DBP) case study. Birth Defects Research Part a-Clinical and Molecular Teratology. 82 , 296, 2008.
  93. Li, Z., and M.G. Ierapetritou Reactive scheduling using parametric programming. AIChE J. 47 , 2610, 2008.
  94. He, K., M.G. Ierapetritou, I.P. Androulakis A graph-based approach to developing adaptive representations of complex reaction mechanisms. Combustion and Flame. 155 , 585, 2008.
  95. Portillo, P.M., F.J. Muzzio, and M.G. Ierapetritou Using Compartment Modeling to Investigate Mixing Behavior of a Continuous Mixer. Journal of Pharmaceutical Innovation. 3 , 161, 2008.
  96. Li, Z., and M.G. Ierapetritou Robust Optimization for Process Scheduling Under Uncertainty. Ind. Eng. Chem. Res. 47 , 4148, 2008.
  97. Portillo, P.M., M.G. Ierapetritou, and F.J. Muzzio Characterization of Continuous Convective Powder Mixing Processes. Powder Technology. 182 , 368, 2008.
  98. Li, Z. and M.G. Ierapetritou Process scheduling under uncertainty: Review and challenges. Comp. Chem. Eng 32 , 715, 2008.
  99. Ierapetritou, M.G. and Z. Jia Short Term Scheduling Under Uncertainty: Sensitivity Analysis. Encyclopedia of Optimization Second Edition, C.A. Floudas and P.M. Pardalos (eds), Springer, 2008.
  100. Ierapetritou, M.G. and I. Banerjee Shape Reconstruction Methods for Nonconvex Feasibility Analysis. Encyclopedia of Optimization Second Edition, C.A. Floudas and P.M. Pardalos (eds), Springer, 2008.
  101. Ierapetritou, M.G. and Z. Jia Gasoline Blending and Distribution Scheduling: An MILP model. Encyclopedia of Optimization Second Edition, C.A. Floudas and P.M. Pardalos (eds), Springer, 2008.

    102. 2007
  102. Davis, E. and M.G. Ierapetritou A Kriging Method for the Solution of Nonlinear Programs with Black-Box Functions. AIChE J. 53 ,2001, 2007
  103. Li, Z. and M.G. Ierapetritou Process scheduling under uncertainty using multiparametric programming. AIChE J. 53 ,3183, 2007
  104. Furman, K.C., Z. Jia, M.G. Ierapetritou A robust event-based continuous time formulation for tank transfer scheduling. Ind. Eng. Chem. Res. 46 , 9126, 2007
  105. Wu, D. and M.G. Ierapetritou Hierarchical approach for production planning and scheduling under uncertainty. Chem. Eng. Process. 46, 1129, 2007
  106. M.G. Ierapetritou and Jia, Z. Short-term scheduling of chemical process including uncertainty. Control Engineering Practice. 15, 1207, 2007
  107. Li, Z. and M.G. Ierapetritou A New Methodology for the General Multiparametric Mixed-Integer Linear Programming (MILP) Problems. Ind. Eng. Chem. Res. 46 , 5141, 2007
  108. Goyal, V., and M.G. Ierapetritou Stochastic MINLP Optimization using Simplicial Approximation. Comp. Chem. Eng 31 ,1081, 2007.
  109. Davis, E. and M.G. Ierapetritou Adaptive optimisation of noisy black-box functions inherent in microscopic models. Comp. Chem. Eng 31 , 466, 2007.
  110. Portillo, P.M., F.J. Muzzio, and M.G. Ierapetritou Hybrid DEM-compartment modeling approach for granular mixing. AIChE Jl 53 , 119, 2007.
  111. Jia, Z. and M.G. Ierapetritou Generate Pareto Optimal Solutions of Scheduling Problems using Normal Boundary Intersection Technique. Comp. Chem. Eng 31 , 268, 2007.

    112. 2006
  112. Portillo, P. F. Muzzio and M.G. Ierapetritou Characterizing Powder Mixing Processes utilizing Compartment Models. Int. Jl. Of Pharm 320 , 14, 2006.
  113. Jia, Z., and M.G. Ierapetritou. Uncertainty Analysis on the Right-Hand-Side for MILP problems AIChE J., 52, 2486, 2006.
  114. Wu, D., and M.G. Ierapetritou. Lagrangean Decomposition Using an Improved Nelder-Mead Approach for Lagrangean Multiplier Update. Comp. Chem. Eng. 30,778, 2006.
  115. Banerjee, I., and M.G. Ierapetritou. An Adaptive Reduction Scheme to Model Reactive Flow. Comb. & Flame 144, 219, 2006.
  116. Bindal, A., M.G. Ierapetritou, S. Balakrishnan, A. Makeev, I. Kevrekidis and A. Armaou Equation-free, coarse-grained computational optimization using timesteppers. Chem. Eng. Sci. 61 , 279, 2006.

    117. 2005
  117. Sharma, N., M.G. Ierapetritou and M.L. Yarmush.Novel Quantitative Tools for Engineering Analysis of Hepatocyte Cultures in Bioartificial Liver Systems. Biotech. & Bioeng. 92(3) , 321, 2005.
  118. Balakrishnan S., Roy A., Ierapetritou M.G., Flach G.P. and Georgopoulos P.G.A Comparative Assessment of Efficient Uncertainty Analysis Techniques for Environmental Fate and Transport Models: Application to the FACT Model. Journal of Hydrology 307(1-4) , 204, 2005.
  119. Goyal, V. and M.G. Ierapetritou. Multiobjective Framework for Modular Design Generation Incorporating Demand Uncertainty. Ind. Eng. Chem. Res. 44 , 3594, 2005.
  120. Banerjee, I., and M.G. Ierapetritou. Feasibility evaluation of nonconvex systems using shape reconstruction techniques. Ind. Eng. Chem. Res. 44 , 3638, 2005.
  121. Sirdeshpande, A.R., M.G. Ierapetritou, M.J. Andrecovich, J.P. Naumovitz. Process synthesis optimization and flexibility evaluation of air separation cycles. AIChE J. 51 , 1190, 2005.

    122. 2004
  122. Jia, Z., and M.G. Ierapetritou. Efficient short-term scheduling of refinery operations based on a continuous time formulation. Comp. Chem. Eng., 28, 1001, 2004.
  123. Jia, Z., and M.G. Ierapetritou. Short-Term Scheduling under Uncertainty Using MILP Sensitivity Analysis. Ind. & Eng. Chem. Res., 43 , 3782, 2004.
  124. Goyal, V. and M.G. Ierapetritou. Computational studies using a novel simplicial-approximation based algorithm for MINLP optimization. Comp. Chem. Eng.,28,1771, 2004.
  125. Banerjee, I., and M.G. Ierapetritou. Model Independent Parametric Decision Making. Ann. Oper. Res. 132, 135, 2004.
  126. Wu, D., and M.G. Ierapetritou. Cyclic short-term scheduling of multiproduct batch plants using continuous-time representation.Comp. Chem. Eng. 28, 2271, 2004.
  127. Goyal, V., and M.G. Ierapetritou. Deterministic framework for robust modular design with integrated-demand data analysis. Ind. Eng. Chem. Res. 43, 6813, 2004.

    128. 2003
  128. Goyal, V. and M.G. Ierapetritou. Framework for Evaluatingthe Feasibility/Operability of Nonconvex Processes. AIChE J,49,1233, 2003.
  129. Banerjee, I., and M.G. Ierapetritou. Developmentof an Adaptive Chemistry Model Considering Micromixing Effects.58, 4537, Chem. Eng. Sci, 2003.
  130. Wu, D., and M.G. Ierapetritou. Decomposition Approaches for the Efficient Solution of Short-TermScheduling Problem. Comp. Chem. Eng., 27, 1261, 2003.
  131. Jia, Z., and M.G. Ierapetritou. Mixed Integer Linear Programming Model for Gasoline Blending and Distribution Scheduling,Ind. Eng. & Chem. Res., 42, 825, 2003.
  132. Bindal, A., M.G. Ierapetritou and J.Khinast. Adaptive Multiscale Solution Of Dynamical Systems In Chemical Processes Using Wavelets. Comp. Chem. Eng.,27, 131, 2003.
  133. Balakrishnan, S., A. Roy, M.G. Ierapetritou, G.P. Flach, and P. Georgopoulos. Uncertainty Reduction and Characterization of Complex Environmental Fate and Transport Models: An Enpirical Bayesian Framework Incorporating the Stochastic Response Surface Method.Water Resources Research, 39, 12, Art . No. 1350, 2003.
  134. Banerjee, I., and M.G. Ierapetritou. Process Synthesis under Parameter Variability. Comput. Chem. Eng., 27,1499,2003.
  135. Goyal, V. and M.G. Ierapetritou. Integration of Data Analysis and Design Optimization for the systematic Generation of Equipment Portfolio. Ind. Eng. & Chem. Res., 42, 5204, 2003.
  136. Jia, Z., M.G. Ierapetritou and J. D. Kelly. Refinery Short-term Scheduling Using Continuous Time Formulation Crude Oil Operations, Ind. Eng. & Chem. Res., 42, 3085, 2003.
  137. Goyal, V. and M.G. Ierapetritou. MINLP Optimization Using Simplicial Approximation Method for Classes of Nonconvex Problems. Accepted for publication, Journal of Global Optimization, 2003.

    138. 2002
  138. Balakrishnan S., P. Georgopoulos,I. Banerjee and M.G.Ierapetritou. Uncertainty Considerations in the Complex Kinetic Mechanisms Reduction. AIChE J , 48 2875, 2002.
  139. Ierapetritou, M.G., D. Wu, J. Vin, P. Sweeney, M.Chigirinskiy. Cost Minimization In An Energy Intensive Plant Using Mathematical Programming Approaches. Ind. & Eng. Chem. Res, 41,5262, 2002.
  140. Goyal, V. and M.G. Ierapetritou. Determination of Operability Limits Using Simplicial Approximation. AIChE J,48, 2902, 2002.
  141. Ierapetritou M.G. and J.Khinast. A New Stability Analysis Approach for Chemical Reactors Based on Iterative Sampling and Optimization. AIChE J., 48, 187, 2002.
  142. Banerjee, I., and M.G. Ierapetritou. An Efficient Uncertainty Analysis Framework for General Black Box Models. Ind. & Eng. Chem. Res, 41, 6687, 2002.

    143. 2001
  143. Vin J, and M.G. Ierapetritou. Robust Short-Term Scheduling of Multiproduct Batch Plants under Demand Uncertainty. Ind. & Eng. Chem. Res, 21, 4543, 2001.
  144. Ierapetritou M.G., and C.A. Floudas. Comments on "An improved RTN continuous-time formulation for the short-term scheduling of multipurpose batch plants". Ind. & Eng. Chem. Res, 40, 5040, 2001.
  145. Sirdeshpande, A., M.G. Ierapetritou, and I.P. Androulakis. Design of Flexible Reduced Kinetic Mechanisms. AIChE J., 47, 2461, 2001.
  146. Floudas, C.A., Z. Gumus, and M.G. Ierapetritou. Global Optimization for the Feasibility Test and Flexibility Index Problems. ,Ind. & Eng. Chem. Res, 40, 4267, 2001.
  147. Ierapetritou M.G. A New Approach for Quantifying Process Feasibility: Convex and one Dimensional Quasi-Convex Regions. AIChE J., 47, 1407, 2001.
  148. Ierapetritou, M.G. Bilevel Optimization: Feasibility Test and Flexibility Index Encyclopedia of Optimization, C.A. Floudas and P.M. Pardalos (eds), Kluwer Academic Publisher, Printed in the Netherlands, 2001.
  149. Ierapetritou, M.G. MINLP: Application in Facility Location-Allocation Encyclopedia of Optimization, C.A. Floudas and P.M. Pardalos (eds), Kluwer Academic Publisher, Printed in the Netherlands, 2001.
  150. Ierapetritou, M.G. Single Facility Location: Multi-objective Rectilinear Distance Location Encyclopedia of Optimization, C.A. Floudas and P.M. Pardalos (eds), Kluwer Academic Publisher, Printed in the Netherlands, 2001.
  151. Ierapetritou, M.G. Single Facility Location: Multi-objective Euclidean Distance Location Encyclopedia of Optimization, C.A. Floudas and P.M. Pardalos (eds), Kluwer Academic Publisher, Printed in the Netherlands, 2001.

    152. 2000
  152. Vin J, and M.G. Ierapetritou. A New Approach for Efficient Rescheduling of Multiproduct Batch Plants. Ind. & Eng. Chem. Res, 39, 4228-4238, 2000.
  153. Ierapetritou M.G., I.P. Androulakis, D.S. Monos and C.A. Floudas, "Structure Prediction of Binding Sites of MHC Class II Molecules based on the Crystal of HLA-DR1 and Global Optimization", State of the Art in Global Optimization: Computational Methods and Applications, Eds: C.A. Floudas and P.M. Pardalos, Kluwer, 2000.

    154. 1999
  154. Ierapetritou M.G., T.S. Hene and C.A. Floudas, Effective Continuous-Time Formulation for Short-Term Scheduling: III Multiple Intermediate Due Dates Ind. & Eng. Chem, 38, 9, 3446-3461 1999.
  155. Ierapetritou M.G., and C.A. Floudas and S. Vansantharajan and A.S. Gullick, A Decomposition Based Approach for Optimal Location of Vertical Wells AIChE J., 45, 4, 844-859, 1999.

    156. 1998
  156. Ierapetritou M.G., and C.A. Floudas, Effective Continuous-Time Formulation for Short-Term Scheduling: I. Multipurpose Batch Processes Ind. & Eng. Chem. Res., 37, 11, 4341-4359, 1998.
  157. Ierapetritou M.G., and C.A. Floudas, Effective Continuous-Time Formulation for Short-Term Scheduling: II. Multipurpose/Multiproduct Continuous Processes Ind. & Eng. Chem. Res., 37, 11, 4360-4374, 1998.
  158. Ierapetritou, M.G, and C.A. Floudas, Short-Term Scheduling: New Mathematical Models vs Algorithmic Improvements. Comp. & Chem. Eng., 22, S419-S426, 1998.
  159. Klepeis, J.L., M.G. Ierapetritou, and C.A. Floudas, Protein Folding and Peptide Docking: A Molecular Modeling and Global Optimization Approach. Comp. & Chem. Eng., 22, S3-S10, 1998
  160. Klepeis, J.L., I.P. Androulakis, M.G. Ierapetritou, and C.A. Floudas, Predicting Solvated Peptide Conformations via Global Minimization of Energetic atom-to-atom Interactions. Comp. & Chem. Eng., 22, 765-788, 1998

    161. 1997
  161. Epperly T., M.G. Ierapetritou and E.N. Pistikopoulos, On the global and efficient solution of stochastic batch plant design problems. Comp. & Chem. Eng., 21, 1411-1431, 1997.
  162. Androulakis I.P., N.N. Nayak, M.G. Ierapetritou, D.S. Monos and C.A. Floudas, Identification of Peptide Binding Specificity for Pocket 1 of HLA-DR1 Based on Global Minimization of Energy Interactions. Proteins: Structure,Function and Genetics, 29, 87-102, 1997.

    163. 1996
  163. Ierapetritou, M.G., E.N. Pistikopoulos and C. A. Floudas, Operational Planning Under Uncertainty. Comp. & Chem. Eng., 20, S1209-S1214, 1996.
  164. Ierapetritou, M.G. and E. N. Pistikopoulos, Batch Plant Design and Operations under Uncertainty Ind. & Eng. Chem. Res., 35, 772-787, 1996.
  165. Ierapetritou, M.G., J. Acevedo and E.N. Pistikopoulos, An Optimization Approach for Process Engineering Problems under Uncertainty. Comp. & Chem. Eng., 20, 703-709, 1996.
  166. Pistikopoulos, E.M, T.V. Thomaidis, M. G. Ierapetritou and A. Melin, Flexibility, Reliability and Maintenance considerations in Batch Plant Design Comp. & Chem. Eng., 20, S1209-S1214, 1996.
  167. Ierapetritou, M.G. and E. N. Pistikopoulos, Global Optimization for Stochastic Planning Scheduling and Design Problems Global Optimization in Engineering Design, I.E.Grossmann (ed), Kluwer Academic Publisher, Printed in the Netherlands, 231-287, 1996.
  168. Visweswaran V., Floudas C.A., Ierapetritou, M.G. and Pistikopoulos E.N., A Decomposition Based Global Optimization Approach for Bi-Level Convex Programming Problems. State of the Art in Global Optimization: Computational Methods and Applications C.A. Floudas and P.M. Pardalos (eds), Kluwer Academic Publisher Printed in the Netherlands, 139-162, 1996.

    169. 1995
  169. Ierapetritou, M.G. and E.N. Pistikopoulos, Design of Multiproduct Batch Plants with Uncertain Demands. Comp. & Chem. Eng., 19, S627-S632, 1995.
  170. Pistikopoulos, E.N. and M.G. Ierapetritou, A Novel Approach for Optimal Process Design under Uncertainty. Comp. & Chem. Engng., 19, 1089-1110, 1995.

    171. 1994
  171. Ierapetritou, M.G. and E. N. Pistikopoulos, A Novel Optimization Approach of Stochastic Planning Models. Ind. & Eng. Chem. Res., 33, 1930-1942, 1994.
  172. Ierapetritou, M.G. and E. N. Pistikopoulos. Simultaneous incorporation of flexibility and economic risk in operational planning under uncertainty. Comp. & Chem. Eng, 18, 163-189, 1994.

REFEREED CONFERENCE PROCEEDINGS

  1. Shah, N., G. Saharidis, Z. Jia, and M.G. Ierapetritou. Centralized-Decentralized Optimization for Refinery Scheduling. Foundations of Computer Aided Process Operations (FOCAPO), Paper # 92, Cambridge, MA, June, 2008
  2. Li, Z. and M.G. Ierapetritou. Robust Scheduling Optimization. Foundations of Computer Aided Process Operations (FOCAPO), Paper # 84, Cambridge, MA, June, 2008
  3. Foteinou, P.T., E. Yang, G.K Saharidis, M.G. Ierapetritou and I.P. Androulakis, A Mixed Integer Optimization Algorithm to Reverse Engineer Transcriptional Regulatory Networks, Proceeding of the 5th International Conference on the Foundations of Computer-Aided Process Operations, Paper #83, Cambridge, MA, June 2008
  4. L. Liang, J.G. Stevens, J.T. Farrell, P.T. Huynh, I.P. Androulakis, and M.G. Ierapetritou. An adaptive approach for coupling detailed chemical kinetics and multidimensional CFD. 5th US Combustion Meeting, San Diego, March 2007.
  5. P.M. Portillo, F.J. Muzzio, M.G. Ierapetritou, Modeling and designing powder mixing processes utilizing compartment modeling. Paper #1.24, European Symposium on Computer Aided Process Engineering (ESCAPE) 16/PSE'06, Garmisch-Partenkirchen, Germany, July 2006.
  6. Z. Jia, M.G. Ierapetritou, Scheduling under demand uncertainty using a new multiparametric programming approach. Paper #1.42, European Symposium on Computer Aided Process Engineering (ESCAPE) 16/PSE'06, Garmisch-Partenkirchen, Germany, July 2006.
  7. E. Davis, M. Ierapetritou, Solving MINLP containing noisy variables and black-box functions using branch-and-bound. Paper #3.16, European Symposium on Computer Aided Process Engineering (ESCAPE) 16/PSE'06, Garmisch-Partenkirchen, Germany, July 2006.
  8. H. Yang, M.L. Yarmush, C. Roth, M.G. Ierapetritou, Minimal reaction sets and metabolic pathways for cultured hepatocytes. Paper #3.54, European Symposium on Computer Aided Process Engineering (ESCAPE) 16/PSE'06, Garmisch-Partenkirchen, Germany, July 2006.
  9. Goyal, V. and M. G. Ierapetritou. Stochastic MINLP Optimization using Simplicial Approximation. CM-058, page 61, European Symposium on Computer Aided Process Engineering (ESCAPE) 15, Barcelona, Spain, May 2005.
  10. Banerjee, I. and M.G. Ierapetritou. A Novel Feasibility Analysis Approach Based on Dimensionality Reduction and Shape Reconstruction. CM-017, page 85, ESCAPE 15, Barcelona, Spain, May 2005.
  11. Banerjee, I. and M.G. Ierapetritou. An Adaptive Reduction Scheme to Develop Flexible Reduced Chemistry Models for Reactive Flow Simulations. MS-036, page 247, ESCAPE 15, Barcelona, Spain, May 2005.
  12. Davis, E. and M.G. Ierapetritou. Adaptive Optimization of Noisy Black-Box Functions Inherent In Microscopic Models. CM-043, page 193, ESCAPE 15, Barcelona, Spain, May 2005.
  13. Jia, Z., and M.G. Ierapetritou. Scheduling Under Uncertainty Using MILP Sensitivity Analysis. MPO006, page 931, ESCAPE 14, Lisbon, 2004.
  14. Sharma, N., M.G. Ierapetritou, and M.L. Yarmush. Novel Quantitative Tools for Engineering Analysis of Hepatocyte Cultures used in Bioartificial Liver Systems. NCp015, Page 1057, ESCAPE 14, Lisbon, 2004.
  15. Goyal, V. and M.G. Ierapetritou. Scenario-Based Approach for Robust Modular Design Generation. SPIp008 p 421. ESCAPE 14, Lisbon, 2004.
  16. Banerjee, I., and M.G. Ierapetritou. Adaptive Chemistry Model Development for Combustion. 16th ONR Propulsion Meeting, Los Angeles, CA (2003).
  17. Jia, Z., and M.G. Ierapetritou. Flexibility Incorporation in Scheduling Decision Making, 8th International Symposium of Process Systems Engineering, (2003).
  18. Jia, Z., and M.G. Ierapetritou. Efficient short-term scheduling of refinery operation based on continuous time formulation. Proceedings of the Foundations of Computer-Aided Process Operations, (2003).
  19. Wu, D., and M.G. Ierapetritou. A Novel Continuous-Time Formulation and Solution Approach for Simultaneous Consideration of Planning and Scheduling Decisions. Proceedings of the Foundations of Computer-Aided Process Operations, (2003).
  20. Ierapetritou, M.G., I.P. Androulakis, Uncertainty considerations in the reduction of chemical reaction mechanisms, Proceedings of the 5th International Conference on Foundations of Computer-Aided Process Design, (2000).
  21. Ierapetritou, M.G. and C.A. Floudas, Modeling and Optimization of Short-term Scheduling of Batch and Semi-Continuous Processes, Proceedings of 2nd Hellenic Scientific Chemical Engineering Conference, Thessaloniki, Athens, Greece (1999).



marianth@soemail.rutgers.edu